STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bsnExtracellular ribonuclease precursor. (905 aa)    
Predicted Functional Partners:
AQR93672.1
Thermophilic serine proteinase precursor.
 
  
 0.759
AQR93671.1
Hypothetical protein.
 
     0.634
AQR95637.1
Hypothetical protein.
   
  
 0.545
AQR94847.1
Acetylornithine deacetylase.
 
  
 0.490
nprM
Bacillolysin precursor; Extracellular zinc metalloprotease.
 
  
 0.476
grsB
Gramicidin S synthase 2.
  
  
 0.457
lgrD
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.442
tycC
Tyrocidine synthase 3; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.418
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.