Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR93673.12-hydroxyglutaryl-CoA dehydratase, D-component. (306 aa)    
Predicted Functional Partners:
fldI_1
R-phenyllactate dehydratase activator.
     0.995
AQR93674.1
Hypothetical protein.
   
0.981
fldI_2
R-phenyllactate dehydratase activator.
     0.687
AQR97644.1
Hypothetical protein.
  
     0.464
AQR95989.1
Membrane protein of unknown function.
 
     0.440
hgdC_1
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
 
   
0.421
cnbCb
2-aminophenol 1,6-dioxygenase subunit beta.
  
     0.420
hgdC_2
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
 
   
0.416
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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