STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypBA1_1Non-reducing end beta-L-arabinofuranosidase. (662 aa)    
Predicted Functional Partners:
AQR93685.1
Alpha-xylosidase BoGH31A precursor; Belongs to the glycosyl hydrolase 31 family.
 
     0.819
abfA
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase.
 
   
 0.784
abf2
Intracellular exo-alpha-L-arabinofuranosidase 2.
 
   
 0.781
abfB_2
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase.
 
   
 0.773
AQR97305.1
Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor.
 
     0.675
ramA2
Bacterial alpha-L-rhamnosidase.
 
     0.668
AQR96650.1
Helix-turn-helix domain protein.
 
     0.661
AQR92984.1
alpha-L-fucosidase.
 
     0.646
AQR93687.1
Hypothetical protein.
 
     0.597
agaA
Alpha-galactosidase A precursor.
 
     0.583
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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