Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xdhAXanthine dehydrogenase molybdenum-binding subunit. (781 aa)    
Predicted Functional Partners:
cdhC
Caffeine dehydrogenase subunit gamma.
 0.999
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
 0.997
mop
Aldehyde oxidoreductase.
 
0.969
pucA
Putative xanthine dehydrogenase subunit A.
 
 
 0.961
mocA
Molybdenum cofactor cytidylyltransferase.
 
  
 0.837
punA
Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
  0.804
AQR93747.1
Hypothetical protein.
     
  0.669
deoD_1
Purine nucleoside phosphorylase DeoD-type.
     
  0.650
deoD_2
Purine nucleoside phosphorylase DeoD-type.
     
  0.650
ppnP
Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
  0.647
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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