Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
pucR_1Purine catabolism regulatory protein. (314 aa)    
Predicted Functional Partners:
cdaR_1
Carbohydrate diacid regulator.
 
     0.639
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
  
 0.597
malQ_2
4-alpha-glucanotransferase.
 
     0.474
AQR97111.1
Putative response regulatory protein.
 
     0.474
pucR_5
Purine catabolism regulatory protein.
  
     0.466
AQR93239.1
Hypothetical protein.
 
     0.457
AQR97667.1
Sporulation inhibitor KapD.
  
     0.452
AQR96656.1
Hypothetical protein.
 
     0.443
malX_1
Maltose/maltodextrin-binding protein precursor.
 
     0.435
AQR97697.1
Hypothetical protein.
 
     0.433
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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