STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR93724.1NMT1/THI5 like protein. (195 aa)    
Predicted Functional Partners:
AQR93735.1
Hypothetical protein.
 
     0.976
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
 0.953
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 
 0.947
cmpD
Bicarbonate transport ATP-binding protein CmpD.
  
 
 0.747
ssuC_4
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
 0.709
ssuC_5
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
 0.702
ssuC_6
Putative aliphatic sulfonates transport permease protein SsuC.
 
 
 0.695
gpr
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.687
ssuC_3
Putative aliphatic sulfonates transport permease protein SsuC.
  
 
 0.679
ssuC_2
Putative aliphatic sulfonates transport permease protein SsuC.
  
 
 0.638
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.