Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ohrROrganic hydroperoxide resistance transcriptional regulator. (144 aa)    
Predicted Functional Partners:
gpx1_1
Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.
 
  
 0.697
opuCC
Carnitine transport binding protein OpuCC precursor.
  
  
 0.525
AQR93751.1
LigB family dioxygenase.
     
 0.500
gpx1_2
Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.
 
  
 0.489
trxB_1
Thioredoxin reductase.
     
 0.488
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
  
  
 0.469
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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