STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxB_1Thioredoxin reductase. (288 aa)    
Predicted Functional Partners:
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.950
sufS_1
Cysteine desulfurase SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.923
sufS_2
Cysteine desulfurase SufS.
  
 
 0.923
trxB_2
Thioredoxin reductase.
  
  
 
0.901
trxA_3
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.831
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.830
trxA_2
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.829
gpx1_1
Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.
  
  
 0.775
gpx1_2
Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.
  
  
 0.741
hcr
NADH oxidoreductase hcr.
   
 
 0.713
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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