trxB_1 protein (Clostridium saccharoperbutylacetonicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

trxB_1

Thioredoxin reductase. (288 aa)

Predicted Functional Partners:

trxA_1

0.935

sufS_1

0.920

sufS_2

0.920

trxB_2

0.901

trxA_3

0.781

trxA_2

0.778

gpx1_1

0.757

gpx1_2

0.727

ahpC

0.725

hcr

0.647

Your Current Organism:

Clostridium saccharoperbutylacetonicum

NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ahpC	gpx1_1	CLSAP_37170	CLSAP_10600	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	0.619
ahpC	gpx1_2	CLSAP_37170	CLSAP_10630	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	0.619
ahpC	hcr	CLSAP_37170	CLSAP_48130	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	NADH oxidoreductase hcr.	0.463
ahpC	trxA_1	CLSAP_37170	CLSAP_10620	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	Thioredoxin; Belongs to the thioredoxin family.	0.550
ahpC	trxA_2	CLSAP_37170	CLSAP_40070	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	Thioredoxin; Belongs to the thioredoxin family.	0.550
ahpC	trxA_3	CLSAP_37170	CLSAP_49600	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	Thioredoxin; Belongs to the thioredoxin family.	0.550
ahpC	trxB_1	CLSAP_37170	CLSAP_10610	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	Thioredoxin reductase.	0.725
ahpC	trxB_2	CLSAP_37170	CLSAP_49590	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	Thioredoxin reductase.	0.725
gpx1_1	ahpC	CLSAP_10600	CLSAP_37170	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	0.619
gpx1_1	gpx1_2	CLSAP_10600	CLSAP_10630	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	0.964
gpx1_1	hcr	CLSAP_10600	CLSAP_48130	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	NADH oxidoreductase hcr.	0.475
gpx1_1	trxA_1	CLSAP_10600	CLSAP_10620	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Thioredoxin; Belongs to the thioredoxin family.	0.682
gpx1_1	trxB_1	CLSAP_10600	CLSAP_10610	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Thioredoxin reductase.	0.757
gpx1_2	ahpC	CLSAP_10630	CLSAP_37170	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	0.619
gpx1_2	gpx1_1	CLSAP_10630	CLSAP_10600	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	0.964
gpx1_2	hcr	CLSAP_10630	CLSAP_48130	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	NADH oxidoreductase hcr.	0.475
gpx1_2	trxA_1	CLSAP_10630	CLSAP_10620	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Thioredoxin; Belongs to the thioredoxin family.	0.589
gpx1_2	trxB_1	CLSAP_10630	CLSAP_10610	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Thioredoxin reductase.	0.727
gpx1_2	trxB_2	CLSAP_10630	CLSAP_49590	Hydroperoxy fatty acid reductase gpx1; Belongs to the glutathione peroxidase family.	Thioredoxin reductase.	0.534
hcr	ahpC	CLSAP_48130	CLSAP_37170	NADH oxidoreductase hcr.	Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.	0.463

page 1 of 3

Server load: low (30%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About