STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR93814.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
macB_3
Macrolide export ATP-binding/permease protein MacB.
  
 0.875
mdtN_3
Multidrug resistance protein MdtN; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.749
mdtA_2
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.749
fliK
Flagellar hook-length control protein FliK.
  
     0.732
bepA
Beta-barrel assembly-enhancing protease.
  
  
 0.724
AQR93772.1
Hypothetical protein.
 
  
 0.718
AQR92871.1
Hypothetical protein.
  
  
 0.694
macB_1
Macrolide export ATP-binding/permease protein MacB.
  
 0.681
macB_4
Macrolide export ATP-binding/permease protein MacB.
  
 0.681
AQR97523.1
Tetratricopeptide repeat protein.
  
     0.680
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.