STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR93820.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
AQR96958.1
Flagellar assembly protein H.
  
    0.696
fliS
Flagellar protein FliS.
 
 
 0.687
fliK
Flagellar hook-length control protein FliK.
  
   
 0.660
fliD
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
    0.619
AQR97524.1
Anaerobic benzoate catabolism transcriptional regulator.
  
     0.591
AQR92810.1
Hypothetical protein.
  
 
   0.589
AQR98099.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.560
yaaT
Hypothetical protein; PSP1 C-terminal conserved region.
  
  
 0.553
AQR93821.1
ABC transporter, phosphonate, periplasmic substrate-binding protein.
 
     0.553
AQR92875.1
Hypothetical protein.
  
    0.544
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.