Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQR93820.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
AQR96958.1
Flagellar assembly protein H.
  
     0.674
fliK
Flagellar hook-length control protein FliK.
  
   
 0.655
AQR92875.1
Hypothetical protein.
  
    0.654
fliD
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
    0.600
AQR97524.1
Anaerobic benzoate catabolism transcriptional regulator.
  
     0.591
AQR92810.1
Hypothetical protein.
  
 
   0.581
murC_1
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
  0.576
AQR98099.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.560
fliS
Flagellar protein FliS.
 
 
 0.554
AQR93821.1
ABC transporter, phosphonate, periplasmic substrate-binding protein.
 
     0.553
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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