STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tuaA_1Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase. (220 aa)    
Predicted Functional Partners:
tagA
Putative N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
   
 0.925
ptk
Tyrosine-protein kinase ptk.
 
  
 0.879
AQR93881.1
Hypothetical protein; Glycosyltransferase family 28 C-terminal domain.
 
   
 0.829
AQR93880.1
Oligosaccharide biosynthesis protein Alg14 like protein.
 
   
 0.826
cap8A_1
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
  
 0.806
ywqD_2
Tyrosine-protein kinase YwqD.
 
  
 0.801
ywqD_1
Tyrosine-protein kinase YwqD.
 
  
 0.782
epsF_1
Putative glycosyltransferase EpsF.
 
 
 0.697
rfbX
Putative O-antigen transporter.
 
  
 0.689
cap8A_2
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
  
 0.688
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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