STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR93885.1Glycosyltransferase sugar-binding region containing DXD motif protein. (242 aa)    
Predicted Functional Partners:
epsJ_1
Putative glycosyltransferase EpsJ.
  
 0.803
AQR93884.1
Hypothetical protein.
     
 0.796
epsF_1
Putative glycosyltransferase EpsF.
 
  
 0.794
AQR93888.1
Polysaccharide biosynthesis protein.
 
  
 0.741
epsE_1
Putative glycosyltransferase EpsE.
 
  
 0.734
maa_1
Maltose O-acetyltransferase.
       0.707
AQR93887.1
Colanic acid biosynthesis protein.
       0.698
AQR93880.1
Oligosaccharide biosynthesis protein Alg14 like protein.
 
   
 0.630
AQR93881.1
Hypothetical protein; Glycosyltransferase family 28 C-terminal domain.
 
   
 0.621
AQR93890.1
NADH dehydrogenase subunit I.
       0.602
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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