Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR93887.1Colanic acid biosynthesis protein. (414 aa)    
Predicted Functional Partners:
epsJ_1
Putative glycosyltransferase EpsJ.
  
  
 0.797
AQR93888.1
Polysaccharide biosynthesis protein.
  
 
 0.772
AQR93890.1
NADH dehydrogenase subunit I.
 
     0.754
epsE_1
Putative glycosyltransferase EpsE.
 
  
 0.737
AQR93884.1
Hypothetical protein.
  
    0.724
AQR93885.1
Glycosyltransferase sugar-binding region containing DXD motif protein.
       0.699
epsF_1
Putative glycosyltransferase EpsF.
  
 
 0.691
maa_1
Maltose O-acetyltransferase.
  
  
 0.667
macB_3
Macrolide export ATP-binding/permease protein MacB.
       0.506
tuaA_1
Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase.
  
  
 0.504
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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