STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsE_1Putative glycosyltransferase EpsE. (329 aa)    
Predicted Functional Partners:
AQR93888.1
Polysaccharide biosynthesis protein.
 
  
 0.843
AQR93890.1
NADH dehydrogenase subunit I.
 
     0.832
arnC_1
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
  
 0.790
AQR97052.1
Beta-monoglucosyldiacylglycerol synthase.
  
 0.790
epsJ_1
Putative glycosyltransferase EpsJ.
 
 
 
0.774
epsF_1
Putative glycosyltransferase EpsF.
 
 0.768
AQR96122.1
Hypothetical protein.
  
 
 0.761
AQR96390.1
Ankyrin repeat protein.
   
 0.760
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.749
AQR93885.1
Glycosyltransferase sugar-binding region containing DXD motif protein.
 
  
 0.734
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.