Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR93913.1Putative O-methyltransferase. (214 aa)    
Predicted Functional Partners:
ydcP_2
Putative protease YdcP precursor.
  
  
 0.922
yneA
Cell division suppressor protein YneA; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
    0.715
udk_2
Uridine kinase.
  
 
  0.681
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
   
 0.679
tdk
Thymidine kinase.
  
 
  0.676
spoVD_1
Stage V sporulation protein D.
       0.673
ydcP_3
Putative protease YdcP precursor.
  
  
 0.673
yhbU
Putative protease YhbU precursor.
  
  
 0.666
ydcP_1
Putative protease YdcP precursor.
  
  
 0.666
AQR97232.1
Peptidase family U32.
  
  
 0.666
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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