STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackA_1Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)    
Predicted Functional Partners:
pta_2
Phosphate acetyltransferase.
 
 
 0.999
pta_3
Phosphate acetyltransferase.
 
 0.985
pta_1
Phosphate acetyltransferase.
 
 0.981
mdlD
NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.978
ydiF_1
Acetate CoA-transferase YdiF; Belongs to the 3-oxoacid CoA-transferase family.
     
 0.944
ydiF_2
Acetate CoA-transferase YdiF; Belongs to the 3-oxoacid CoA-transferase family.
     
 0.944
ald
3-succinoylsemialdehyde-pyridine dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.943
acyP
Acylphosphatase.
     
 0.913
ackA_2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 
0.901
plsX
Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
 
 0.842
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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