Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
spoIIIEDNA translocase SpoIIIE. (794 aa)    
Predicted Functional Partners:
essB
Putative membrane protein essB.
  
 
 0.851
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.810
parB
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
  
  
 0.809
noc
Nucleoid occlusion protein; Belongs to the ParB family.
  
  
 0.789
ftsA_1
Cell division protein FtsA.
  
   
 0.781
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.766
ispH2
30S ribosomal protein S1 homolog.
 
  
 0.762
ftsW_2
Lipid II flippase FtsW; Belongs to the SEDS family.
 
  
 0.752
esxA
Virulence factor EsxA; Belongs to the WXG100 family.
  
 
 0.747
divIB
Cell division protein DivIB; Essential cell division protein.
  
 
 0.737
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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