Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
oppD_2Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (322 aa)    
Predicted Functional Partners:
oppC_1
Oligopeptide transport system permease protein OppC.
 0.993
gsiD_2
Glutathione transport system permease protein GsiD.
 0.989
gsiC
Glutathione transport system permease protein GsiC.
 
 0.988
oppC_2
Oligopeptide transport system permease protein OppC.
 0.987
gsiD_1
Glutathione transport system permease protein GsiD.
 0.977
oppB
Oligopeptide transport system permease protein OppB.
 
 0.970
oppC_3
Oligopeptide transport system permease protein OppC.
 0.966
dppB_2
Dipeptide transport system permease protein DppB.
 
 0.951
dppB_3
Dipeptide transport system permease protein DppB.
 
 0.951
dppB_1
Dipeptide transport system permease protein DppB.
 
 0.949
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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