Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR94074.1Pyridoxamine 5'-phosphate oxidase. (148 aa)    
Predicted Functional Partners:
nifD_2
Nitrogenase molybdenum-iron protein alpha chain.
       0.613
nifK_2
Nitrogenase molybdenum-iron protein beta chain.
       0.613
nifD_1
Nitrogenase molybdenum-iron protein alpha chain.
       0.517
nifK_1
Nitrogenase molybdenum-iron protein beta chain.
       0.517
pdxK
Pyridoxine kinase; Belongs to the pyridoxine kinase family.
    
  0.482
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
    
  0.439
lldD_1
L-lactate dehydrogenase.
   
    0.439
lldD_2
L-lactate dehydrogenase.
   
    0.439
AQR97879.1
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase.
   
    0.439
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
   
    0.432
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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