Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
emrYPutative multidrug resistance protein EmrY; Belongs to the major facilitator superfamily. (475 aa)    
Predicted Functional Partners:
emrK_2
Putative multidrug resistance protein EmrK.
 
 0.751
emrA_1
Multidrug export protein EmrA.
 
 0.731
emrA_2
Multidrug export protein EmrA.
 
 0.666
AQR94102.1
Transcriptional regulator PadR-like family protein.
       0.530
pheA
P-protein.
  
 
 0.446
emrK_4
Putative multidrug resistance protein EmrK.
 
 0.441
AQR94821.1
Multidrug efflux system protein MdtL.
 
   
 0.427
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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