Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
divKPolar-differentiation response regulator DivK. (356 aa)    
Predicted Functional Partners:
rpfG_4
Cyclic di-GMP phosphodiesterase response regulator RpfG.
     0.914
todS_3
Sensor histidine kinase TodS.
     0.765
pdtaR_2
Putative transcriptional regulatory protein pdtaR.
  
     0.762
arcB
Aerobic respiration control sensor protein ArcB.
 
     0.760
tmoS_1
Sensor histidine kinase TmoS.
 
     0.755
tmoS_2
Sensor histidine kinase TmoS.
  
     0.749
phoR_11
Alkaline phosphatase synthesis sensor protein PhoR.
 
     0.748
phoR_12
Alkaline phosphatase synthesis sensor protein PhoR.
  
     0.741
todS_2
Sensor histidine kinase TodS.
 
     0.732
yycG_3
Sensor histidine kinase YycG.
  
     0.725
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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