Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pgaBpoly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase precursor. (256 aa)    
Predicted Functional Partners:
xynY_1
Endo-1,4-beta-xylanase Y precursor.
     
 0.656
arnT
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
  
 
 0.519
AQR96062.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
 0.519
AQR96339.1
Hypothetical protein.
  
 
 0.519
AQR96692.1
Hypothetical protein.
 
   
 0.500
AQR93796.1
Hypothetical protein.
 
   
 0.488
AQR96603.1
Hypothetical protein.
 
   
 0.486
xynZ_2
Endo-1,4-beta-xylanase Z precursor.
     
 0.459
AQR96122.1
Hypothetical protein.
  
  
 0.426
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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