Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR94181.1Bacterial regulatory protein, luxR family. (256 aa)    
Predicted Functional Partners:
ywaC_1
GTP pyrophosphokinase YwaC.
     
 0.671
cat
Chloramphenicol acetyltransferase; This enzyme is an effector of chloramphenicol resistance in bacteria; Belongs to the chloramphenicol acetyltransferase family.
 
    0.554
gloB_2
Hydroxyacylglutathione hydrolase.
 
 
 
 0.529
AQR93500.1
Hypothetical protein.
  
     0.510
yflN
Putative metallo-hydrolase YflN.
 
 
 
 0.507
devR
Transcriptional regulatory protein DevR (DosR).
  
 
 0.505
degU_2
Transcriptional regulatory protein DegU.
  
 
 0.505
degU_3
Transcriptional regulatory protein DegU.
  
 
 0.505
AQR94180.1
Flavodoxin domain protein.
  
    0.501
gloB_4
Hydroxyacylglutathione hydrolase.
 
 
 
 0.491
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.