rluC protein (Clostridium saccharoperbutylacetonicum)

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rluC

Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family. (323 aa)

Predicted Functional Partners:

spoVB_2

0.805

rplM

0.713

obg

0.713

AQR97679.1

0.694

rplC

0.690

rplU

0.670

rplQ

0.647

spoU

0.641

rplO

0.641

radC

0.636

Your Current Organism:

Clostridium saccharoperbutylacetonicum

NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR97679.1	rluC	CLSAP_50100	CLSAP_15270	CYTH domain protein.	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	0.694
obg	rluC	CLSAP_49430	CLSAP_15270	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	0.713
obg	rplC	CLSAP_49430	CLSAP_01850	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.717
obg	rplM	CLSAP_49430	CLSAP_02200	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.809
obg	rplO	CLSAP_49430	CLSAP_02040	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.832
obg	rplQ	CLSAP_49430	CLSAP_02150	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	50S ribosomal protein L17.	0.813
obg	rplU	CLSAP_49430	CLSAP_49460	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.951
obg	spoU	CLSAP_49430	CLSAP_01660	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.660
radC	rluC	CLSAP_49880	CLSAP_15270	Hypothetical protein; Belongs to the UPF0758 family.	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	0.636
rluC	AQR97679.1	CLSAP_15270	CLSAP_50100	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	CYTH domain protein.	0.694
rluC	obg	CLSAP_15270	CLSAP_49430	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.713
rluC	radC	CLSAP_15270	CLSAP_49880	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	Hypothetical protein; Belongs to the UPF0758 family.	0.636
rluC	rplC	CLSAP_15270	CLSAP_01850	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.690
rluC	rplM	CLSAP_15270	CLSAP_02200	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.713
rluC	rplO	CLSAP_15270	CLSAP_02040	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.641
rluC	rplQ	CLSAP_15270	CLSAP_02150	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L17.	0.647
rluC	rplU	CLSAP_15270	CLSAP_49460	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.670
rluC	spoU	CLSAP_15270	CLSAP_01660	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.641
rluC	spoVB_2	CLSAP_15270	CLSAP_15280	Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.	Stage V sporulation protein B.	0.805
rplC	obg	CLSAP_01850	CLSAP_49430	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.717

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