STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR94248.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
AQR94249.1
Hypothetical protein.
       0.727
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.712
AQR96039.1
Cysteine-rich secretory protein family protein.
  
  
 0.599
AQR94250.1
Hypothetical protein.
       0.449
AQR94251.1
Hypothetical protein.
       0.449
AQR94252.1
Hypothetical protein.
       0.449
lipC
Spore germination lipase LipC.
  
 
 0.443
AQR93233.1
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1.
  
 
 0.443
rhgT
Rhamnogalacturonan acetylesterase RhgT.
  
 
 0.443
AQR95094.1
GDSL-like lipase/acylhydrolase.
  
 
 0.443
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.