STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR94263.1Putative AAA-ATPase. (592 aa)    
Predicted Functional Partners:
AQR93273.1
Putative AAA-ATPase.
 
    0.714
dnaC_2
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.684
bepA
Beta-barrel assembly-enhancing protease.
  
     0.547
dnaQ
DNA polymerase III subunit epsilon.
 
   
 0.501
AQR96062.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.468
AQR93491.1
Hypothetical protein.
 
     0.429
AQR96173.1
Hypothetical protein.
  
     0.426
AQR93057.1
Putative RNA polymerase sigma factor SigI.
 
     0.413
AQR94225.1
Hypothetical protein.
  
     0.412
AQR97667.1
Sporulation inhibitor KapD.
  
     0.412
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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