Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
spxARegulatory protein Spx; Belongs to the ArsC family. (121 aa)    
Predicted Functional Partners:
ywnA_2
Putative HTH-type transcriptional regulator YwnA.
  
  
 0.602
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.595
rhgT
Rhamnogalacturonan acetylesterase RhgT.
  
    0.595
ybiR
Inner membrane protein YbiR.
 
  
 0.583
AQR94326.1
Hypothetical protein.
       0.555
AQR94423.1
DSBA-like thioredoxin domain protein.
    
 
 0.552
AQR93233.1
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1.
   
    0.551
mtnN
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
  
 0.504
mtrB
Sensor histidine kinase MtrB.
   
  
 0.468
lytB_4
Putative endo-beta-N-acetylglucosaminidase precursor.
 
    0.461
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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