Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AQR94351.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.849
yfkN
Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family.
     
  0.640
tagH
Teichoic acids export ATP-binding protein TagH.
   
    0.600
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
   
    0.589
cymR_2
HTH-type transcriptional regulator CymR.
  
    0.583
trpP
Putative tryptophan transport protein.
  
     0.540
yhcR
Endonuclease YhcR precursor; Belongs to the 5'-nucleotidase family.
     
  0.517
tagG
Teichoic acid translocation permease protein TagG.
   
    0.501
AQR95718.1
5' nucleotidase, deoxy (pyrimidine), cytosolic type C protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
  
     0.463
AQR94728.1
Acyltransferase PapA5.
   
    0.440
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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