Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR94395.1Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (285 aa)    
Predicted Functional Partners:
uxaC_1
Uronate isomerase.
 
 
 0.944
uxuA_1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.935
AQR96122.1
Hypothetical protein.
  
 0.933
grsB
Gramicidin S synthase 2.
  
 0.919
AQR97917.1
long-chain-fatty-acid--AMP ligase FadD29.
  
 0.898
AQR94628.1
long-chain-fatty-acid--AMP ligase FadD32.
  
 0.890
uxaC_3
Uronate isomerase.
 
 
 0.859
uxaC_4
Uronate isomerase.
 
 
 0.858
uxaC_2
Uronate isomerase.
 
 
 0.851
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.820
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.