STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaA_2Chromosomal replication initiator protein DnaA. (193 aa)    
Predicted Functional Partners:
dnaC_2
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.688
AQR94416.1
Hypothetical protein; N-terminal phage replisome organiser (Phage_rep_org_N).
  
  
 0.619
dinG
Hypothetical protein; Probable ATP-dependent helicase DinG homolog.
  
  
 0.578
topB_1
DNA topoisomerase 3.
 
  
 0.488
spoVT_2
Stage V sporulation protein T.
       0.463
yedZ
Sulfoxide reductase heme-binding subunit YedZ.
  
     0.446
AQR93254.1
Ferric reductase like transmembrane component.
  
     0.425
fliK
Flagellar hook-length control protein FliK.
  
     0.403
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.