Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AQR94423.1DSBA-like thioredoxin domain protein. (210 aa)    
Predicted Functional Partners:
mgsR
Regulatory protein MgsR; Belongs to the ArsC family.
   
 
 0.570
mmuM
Homocysteine S-methyltransferase.
   
    0.570
urdA
Urocanate reductase precursor.
  
    0.562
azr
NADPH azoreductase.
  
    0.559
spxA
Regulatory protein Spx; Belongs to the ArsC family.
    
 
 0.552
dgkA
Undecaprenol kinase.
     
  0.480
ywnA_1
Putative HTH-type transcriptional regulator YwnA.
  
    0.459
AQR96634.1
Homocysteine methyltransferase.
   
    0.451
relA_1
GTP pyrophosphokinase.
     
  0.428
relA_2
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.428
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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