Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR94440.1Bacterial regulatory protein, tetR family. (197 aa)    
Predicted Functional Partners:
AQR94439.1
ABC-2 family transporter protein.
 
     0.831
ybhF_1
Putative ABC transporter ATP-binding protein YbhF.
 
  
 0.816
tetR_3
Tetracycline repressor protein class B from transposon Tn10.
  
     0.731
tetR_2
Tetracycline repressor protein class B from transposon Tn10.
  
     0.729
tetR_4
Tetracycline repressor protein class B from transposon Tn10.
  
     0.724
AQR94450.1
Hypothetical protein.
  
     0.616
fadR_2
Fatty acid metabolism regulator protein.
  
     0.562
fadR_3
Fatty acid metabolism regulator protein.
  
     0.553
AQR94526.1
Hypothetical protein.
  
     0.480
yxaF
Putative HTH-type transcriptional regulator YxaF.
  
     0.473
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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