STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artJ_1ABC transporter arginine-binding protein 1 precursor. (283 aa)    
Predicted Functional Partners:
tcyB
L-cystine transport system permease protein TcyB.
 
 0.952
glnP_1
Glutamine transport system permease protein GlnP.
 
 0.919
artQ_2
Arginine transport system permease protein ArtQ.
 
 0.918
glnP_2
Putative glutamine ABC transporter permease protein GlnP.
 
 0.909
artM_2
Arginine transport ATP-binding protein ArtM.
 
 0.899
artM_3
Arginine transport ATP-binding protein ArtM.
 
 0.899
yecS
Inner membrane amino-acid ABC transporter permease protein YecS.
 
 0.897
artM_4
Arginine transport ATP-binding protein ArtM.
 
 0.897
glnQ_3
Glutamine transport ATP-binding protein GlnQ.
 
 0.895
artQ_1
Arginine transport system permease protein ArtQ.
 
 0.894
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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