STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
robRight origin-binding protein. (305 aa)    
Predicted Functional Partners:
AQR95938.1
Hypothetical protein.
 
     0.572
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
  0.569
cfg
Putative AgrB-like protein.
  
     0.535
AQR96397.1
Pyridoxamine 5'-phosphate oxidase.
 
     0.506
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.503
AQR95874.1
Hypothetical protein.
  
     0.477
AQR93110.1
Hypothetical protein.
  
     0.470
AQR94508.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.466
melR_2
Melibiose operon regulatory protein.
  
     0.462
AQR96319.1
Hypothetical protein; TfoX C-terminal domain.
  
     0.459
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.