STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fldZ_12-enoate reductase FldZ. (691 aa)    
Predicted Functional Partners:
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
 0.999
hcr
NADH oxidoreductase hcr.
 
 0.969
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 0.853
mmgC
acyl-CoA dehydrogenase.
  
 
 0.812
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.787
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 
 0.759
echA8
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.712
acrB_1
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.709
acrB_2
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.709
acrB_3
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.709
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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