Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gltR_1HTH-type transcriptional regulator GltR; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
cynR_1
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
    0.779
cynR_6
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
    0.778
gltC_1
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
  
     0.772
gltC_4
HTH-type transcriptional regulator GltC.
  
     0.772
cynR_3
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
     0.766
gltB_2
Ferredoxin-dependent glutamate synthase 1.
     
 0.457
thlA_4
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.445
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.427
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.410
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.406
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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