STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgK_22-dehydro-3-deoxygluconokinase. (318 aa)    
Predicted Functional Partners:
sacA
Sucrose-6-phosphate hydrolase.
 
 0.936
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 0.828
fruA_1
Fructan beta-fructosidase precursor.
 
 0.765
fba_1
Fructose-bisphosphate aldolase.
  
 
 0.743
gatY
D-tagatose-1,6-bisphosphate aldolase subunit GatY.
  
 
 0.743
AQR94554.1
Sucrose phosphorylase.
   
 0.732
kdgA_1
KHG/KDPG aldolase.
 
 
 0.726
kdgA_2
KHG/KDPG aldolase.
 
 
 0.721
fba_2
Fructose-bisphosphate aldolase.
  
 
 0.686
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.666
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.