Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
manX_2PTS system mannose-specific EIIAB component. (166 aa)    
Predicted Functional Partners:
manX_1
PTS system mannose-specific EIIAB component.
 
 0.998
manX_5
PTS system mannose-specific EIIAB component.
 
 0.998
manY_1
Mannose permease IIC component.
 
 0.992
manZ_1
Mannose permease IID component.
 
 0.991
manZ_2
Mannose permease IID component.
 
 0.981
manZ_3
Mannose permease IID component.
 
 0.981
manY_2
Mannose permease IIC component.
 
 0.980
manY_3
Mannose permease IIC component.
 
 0.980
fruA_2
PTS system fructose-specific EIIABC component.
  
 
 0.926
manX_3
PTS system mannose-specific EIIAB component.
  
 
 0.856
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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