Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nylB6-aminohexanoate-dimer hydrolase. (330 aa)    
Predicted Functional Partners:
soxS
Regulatory protein SoxS.
     
 0.733
iap_1
Putative endopeptidase p60 precursor.
  
 
 0.585
mepH_1
Murein DD-endopeptidase MepH precursor.
  
 
 0.585
iap_2
Putative endopeptidase p60 precursor.
  
 
 0.585
mepH_2
Murein DD-endopeptidase MepH precursor.
  
 
 0.560
AQR95906.1
Hypothetical protein.
 
   
 0.556
AQR95649.1
Glyoxalase-like domain protein.
  
 
 0.548
grsB
Gramicidin S synthase 2.
  
  
 0.538
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
 0.524
ponA
Penicillin-binding protein 1A/1B.
     
 0.521
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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