STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR94635.1Putative ABC transporter ATP-binding protein. (598 aa)    
Predicted Functional Partners:
AQR94636.1
Putative multidrug export ATP-binding/permease protein.
 
    
0.830
AQR94631.1
Hypothetical protein.
 
     0.782
AQR96353.1
Hypothetical protein.
     0.771
ecfT_2
Energy-coupling factor transporter transmembrane protein EcfT.
  
   
 0.770
btr_1
HTH-type transcriptional activator Btr.
 
  
 0.745
marA
Multiple antibiotic resistance protein MarA.
 
  
 0.675
pstB3
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.657
mepA_3
Multidrug export protein MepA.
 
 
 0.628
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
 
0.616
pchR
Regulatory protein PchR.
  
  
 0.586
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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