Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gltC_1HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
gltR_1
HTH-type transcriptional regulator GltR; Belongs to the LysR transcriptional regulatory family.
  
     0.772
yofA_1
HTH-type transcriptional regulator YofA; Belongs to the LysR transcriptional regulatory family.
  
     0.771
cynR_3
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
     0.753
cysL
HTH-type transcriptional regulator CysL; Belongs to the LysR transcriptional regulatory family.
  
     0.733
gltB_2
Ferredoxin-dependent glutamate synthase 1.
 
   
 0.535
AQR94646.1
Amidohydrolase.
       0.500
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.427
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.410
AQR94647.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
       0.410
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.406
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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