STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR94647.1Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase. (354 aa)    
Predicted Functional Partners:
AQR94437.1
Hypothetical protein.
  
     0.659
malT_1
HTH-type transcriptional regulator MalT.
  
     0.640
AQR94646.1
Amidohydrolase.
       0.615
AQR95936.1
Hypothetical protein.
  
     0.507
AQR98109.1
Hypothetical protein.
  
     0.430
AQR94648.1
Alpha/beta hydrolase family protein.
       0.425
ycgJ_1
Putative methyltransferase YcgJ.
 
     0.418
gltC_1
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
       0.410
AQR94649.1
Hypothetical protein.
       0.408
AQR96122.1
Hypothetical protein.
       0.402
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.