Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
xynAEndo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (213 aa)    
Predicted Functional Partners:
celK
Cellulose 1,4-beta-cellobiosidase precursor.
 
   
 0.878
xynD_2
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.814
xynD_1
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.807
xynC_1
Glucuronoxylanase XynC precursor; Belongs to the glycosyl hydrolase 30 family.
  
  
 0.794
AQR97306.1
Hypothetical protein.
  
  
 0.794
xynY_1
Endo-1,4-beta-xylanase Y precursor.
 
   
 0.788
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.783
AQR97380.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.781
AQR94478.1
Xyloglucanase precursor.
 
     0.777
xynC_2
alpha-L-arabinofuranosidase C precursor.
  
   
 0.773
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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