STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kce3-keto-5-aminohexanoate cleavage enzyme. (278 aa)    
Predicted Functional Partners:
atoD_2
Acetate CoA-transferase subunit alpha.
 
  
 0.983
ctfA
Butyrate--acetoacetate CoA-transferase subunit A.
 
  
 0.978
ctfB_2
Butyrate--acetoacetate CoA-transferase subunit B.
 
  
 0.966
atoD_1
Acetate CoA-transferase subunit alpha.
 
  
 0.956
ctfB_3
Butyrate--acetoacetate CoA-transferase subunit B.
 
  
 0.955
ctfB_1
Butyrate--acetoacetate CoA-transferase subunit B.
 
  
 0.954
kynB
Kynurenine formamidase.
 
    0.921
AQR94765.1
Hypothetical protein.
 
     0.718
mmgB_3
Putative 3-hydroxybutyryl-CoA dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.683
AQR95629.1
Cupin domain protein.
 
    0.608
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.