Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR94771.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
AQR97218.1
NADH oxidase.
  
  
 0.918
fldZ_3
2-enoate reductase FldZ.
     
 0.906
AQR94386.1
NADPH-dependent FMN reductase.
 
     0.762
AQR95401.1
NADPH-dependent FMN reductase.
 
     0.755
kynB
Kynurenine formamidase.
  
     0.739
AQR94765.1
Hypothetical protein.
  
     0.734
zraR_1
Transcriptional regulatory protein ZraR.
 
     0.627
AQR97202.1
NADPH-dependent FMN reductase.
 
     0.627
sgcG_8
2-amino-4-deoxychorismate dehydrogenase.
 
     0.603
AQR96730.1
NADPH-dependent FMN reductase.
 
     0.586
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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