Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR94836.1Fibronectin-binding protein (FBP). (219 aa)    
Predicted Functional Partners:
bepA
Beta-barrel assembly-enhancing protease.
  
 
 
 0.621
AQR94837.1
Mor transcription activator family protein.
 
     0.534
AQR94225.1
Hypothetical protein.
  
     0.528
dnaQ
DNA polymerase III subunit epsilon.
  
     0.493
AQR95018.1
Hypothetical protein.
  
   
 0.472
tetM
Tetracycline resistance protein TetM.
  
   
 0.459
AQR94430.1
Glyoxalase-like domain protein.
  
    0.451
AQR98250.1
LysE type translocator.
 
   
 0.446
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.445
AQR97667.1
Sporulation inhibitor KapD.
  
     0.444
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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