STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylG_1Xylose import ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (525 aa)    
Predicted Functional Partners:
xylF
D-xylose-binding periplasmic protein precursor.
 
 0.997
xylH_1
Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
yjfF
Inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 0.971
ytfT
Inner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family.
 0.970
alsB
D-allose-binding periplasmic protein precursor.
 
 0.953
rbsB
D-ribose-binding periplasmic protein precursor.
 
 0.945
ytfQ
ABC transporter periplasmic-binding protein YtfQ precursor.
 
 0.943
mglC
Galactoside transport system permease protein MglC.
 
 0.940
xylH_2
Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.922
chvE
Multiple sugar-binding periplasmic receptor ChvE precursor.
 
 0.876
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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