Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR94858.1Hypothetical protein; L-fucose isomerase, C-terminal domain. (494 aa)    
Predicted Functional Partners:
AQR94857.1
Hypothetical protein.
 
   
 0.909
fucK
L-fuculokinase.
 
 
 0.870
xylB_1
Xylulose kinase.
 
 
 0.834
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
  
 0.753
rhaB
Rhamnulokinase.
 
 
 0.746
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
 0.695
xylB_2
Xylulose kinase; Belongs to the FGGY kinase family.
 
 
 0.688
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
      
 0.679
fucO
Lactaldehyde reductase.
  
  
 0.678
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.648
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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