Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR94865.1Zinc-responsive transcriptional regulator. (329 aa)    
Predicted Functional Partners:
bmrR_1
Multidrug-efflux transporter 1 regulator.
 
   
 0.642
AQR94866.1
Transcriptional repressor DicA.
 
  
 0.638
AQR95938.1
Hypothetical protein.
 
     0.605
pgsA_3
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
 
     0.573
glnA_2
Glutamine synthetase.
  
 
 0.522
AQR97481.1
Hypothetical protein.
  
    0.521
AQR94864.1
Metallo-beta-lactamase L1 precursor.
     
 0.517
sigA
RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
 
 0.511
rpoS
RNA polymerase sigma factor RpoS; Belongs to the sigma-70 factor family.
  
 
 0.511
AQR96621.1
Hypothetical protein.
 
     0.499
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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