STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR94872.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
fliN
Flagellar motor switch protein FliN.
   
 
 0.784
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
  0.682
AQR94871.1
Hypothetical protein.
       0.636
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
  
 
 0.605
AQR98121.1
Phage capsid family protein.
   
   0.537
AQR98119.1
Phage head-tail joining protein.
   
   0.536
AQR95550.1
Hypothetical protein.
   
   0.505
AQR96122.1
Hypothetical protein.
  
  
 0.505
AQR98123.1
Phage portal protein.
   
   0.505
fliE
Flagellar hook-basal body complex protein FliE.
   
   0.475
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.